Feed aggregator

Bug #4246 (Active): logo not displaying

Scratchpads issue queue - Sun, 2014-09-21 15:15

I have tried to upload a new logo to the site (annonaceae.myspecies.info) but it doesn't appear. I tried the same file on a diff scratchpad I have and it works. I attach the file here. I have also tried with different extension like jpeg, png and tiff, but without muck.
What is going wrong?

Bug #4245 (Active): DwC-A taxon file contains invalid namePublishedID values

Scratchpads issue queue - Thu, 2014-09-18 15:28


For a number of taxa, the namePublishedInID (Original Publication) has the same, seemingly erroneous value "http://families.e-monocot.org/node/", e.g. Typhaceae (taxonID=urn:kew.org:wcs:family:40). The 2 issues are:
1)Multiple different namePublishedIn "references" have the same conflicting namePublishedInID rather than unique identifiers.
2)These references do not appear in the references extension file.

Am I right in guess that the 2 issues stem from a common root cause; nodes not being created for them? If so can nodes be created for them?


Bug #4244 (Active): Lack of button to create/request new account on login area

Scratchpads issue queue - Tue, 2014-09-16 16:08

When the login button is pressed on the front page, no clickable link appears to allow requesting/creation of a new account. Consequently, no-one is aware they can join the scratchpad. Can this link be made available?

Bug #4243 (Active): import file incomplete

Scratchpads issue queue - Thu, 2014-09-04 23:47

I have just started a new scratchpad. When I download the import file (via import) I only get the first few columns.
(Term name Parent Term Name Term description GUID Parent GUID) and that is it.
Where did all the other fields go?


Task #4242 (Active): Vagrant

Scratchpads issue queue - Wed, 2014-09-03 10:51

Create a Vagrant project for developing the Scratchpads. This will allow us to easily package and deploy the Scratchpads to new servers, and will also make the process of setting up a development box much simpler.

Bug #4241 (Active): Pensoft writing tool in eMonocot scratchpad

Scratchpads issue queue - Mon, 2014-09-01 13:58

Hi team,

I'm trying to play around with the Pensoft Writing Tool in my Palms of New Guinea scratchpad to see how it works, what info you need and can include, how flexible it is, and what the 'product' looks like during the process and at the end, and if you can export it in different formats.

I am currently getting the message 'It is not currently possible to publish this to the Pensoft Writting Tool. We hope to have this working in the near future.' - is it not possible to use this at the moment? I really hoped to do so!

Bug #4240 (Active): Locked field

Scratchpads issue queue - Tue, 2014-08-26 22:24

The field labeled "Phylogeny" (Structure - Mosquito description page) is locked. Please unlock it. It is not needed and should be deleted as it has been replaced with "Phylogenetic relationships".

Bug #4239 (Active): Cron is failing to run on solanaceaesource.org

Scratchpads issue queue - Tue, 2014-08-26 09:32

Cron is failing to run completely on the solanceaesource.org website. This is possibly as a result of the size of the site (number of terms and number of nodes).

Bug #4238 (Active): fix media icons for .txt and .xls files in specimen records

Scratchpads issue queue - Sat, 2014-08-23 15:20

See http://africhthy.org/content/cumv-fish-880745074# and note that thumbnails for .png and .xls appear as missing image icon. Could not these show standard icon for text and Excel files?

Bug #4237 (Active): Addition of people to specimen records on recent import...

Scratchpads issue queue - Fri, 2014-08-22 18:43

After my recent 1-5000 specimen import I went to check if the specimens imported or not - they did but sometimes with additional collectors not present in the Brahms upload file (Knapp 8225 has only Personcode 49 in the original file (with a sheet from USM), but has ended up with another person attached as well); Knapp 10689 has ended up with S.Stern attached as well (Personcode-19248) that should not be there, and with no identification. This specimen upload has gone wrong I think!

Bug #4236 (Active): Locality data not importing from Brahms export

Scratchpads issue queue - Fri, 2014-08-22 18:38

Hi there....
The fix for this seems not to have worked - now neither the locality nor the locality text fields are displaying!

Bug #4235 (Active): Unable to Import taxa

Scratchpads issue queue - Fri, 2014-08-22 16:51

I am unable to import about half of the taxa for the site. The error that I am receiving is SQLSTATE23000: Integrity constraint violation: 1062 Duplicate entry '0' for key 'revision_id'

Bug #4234 (Active): Cannot change name of field

Scratchpads issue queue - Thu, 2014-08-21 22:22

Cannot change the name of the field "Included taxa" in the Mosquito Description Page.

Bug #4233 (Active): Field is locked

Scratchpads issue queue - Thu, 2014-08-21 21:47

The field Phylogeny is locked and cannot be edited. I want to change the title of this field. I am currently off line for major changes to the site. Please correct so that I can edit the title of this field.

Bug #4232 (Active): Locality data not importing from Brahms export

Scratchpads issue queue - Wed, 2014-08-20 19:56

Katherine and I discovered that the detailed locality data were not being exported from Brahms, but now they are but they are still not being uploaded into the Scratchpad. I suspect that this is the result of a column in the import file being labelled as something that the scratchpad does not understand (location is a one word piece of text, and locality text is the descriptive bit) - location I can see, but not locality text.

Thanks - Sandy

Bug #4231 (Active): Display of "type" for taxon term

Scratchpads issue queue - Wed, 2014-08-20 14:56

It would be good to have a type block to sit with nomenclature so the type summaries (not the same as specimens) so all names (including synonyms) could be seen by users.

Bug #4230 (Active): Error trying to import names

Scratchpads issue queue - Mon, 2014-08-18 18:42

I have been unable to import taxon names from the lifedesk classification to Scratchpad. It gets to a certain point and then stops. The error message that I get is this: SQLSTATE23000: Integrity constraint violation: 1062 Duplicate entry '0' for key 'revision_id

I might have brought this to you guys before but I could use all the help I can get.

Bug #4229 (Active): Removed taxonomy records in list

Scratchpads issue queue - Mon, 2014-08-18 16:01

Is there any way to fully remove deleted taxonomic records from the drop down menu? This can create a bunch of confusion for contributors. This comes from multiple imports.

Bug #4228 (Active): Implement DwC-A import

Scratchpads issue queue - Mon, 2014-08-18 09:56

The GIASIP website will acquire content from an instance of the IPT. Data will be provided in a DwC-A format, which means we need to be able to read this format, and import all content from it. I would imagine the DwC-A, and specifically the meta.xml file could be read, and different Feeds importers created based on the structure.

Bug #4227 (Active): Migration problem: Google Analytics tags not migrated to upgraded site

Scratchpads issue queue - Sun, 2014-08-17 12:36

Hi guys,

Only just realised this but we've had no GA data since the migration, so it looks as though our GA tags were not migrated across - can you remedy, please?



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